Our top pick of the best small boutique hotels in the Cyclades, luxury hotels, holiday homes and villas in the Cyclades
The Cyclades are one of the most popular holiday destinations in Greece. They are an archipelago of 39 islands in the Aegean Sea, of which only 24 are inhabited. The main islands of the Cyclades are Naxos, Milos, Mykonos, Paros, Santorini, Syros and Tinos. Hardly any other island group is as popular as the Cyclades, which is why we at Secretplaces have set out in search of exceptional accommodation on the islands, away from the tourist crowds and always with individual flair. Here you will find our hand-picked selection of the best boutique hotels, beautiful small hotels, B&Bs, holiday homes and cool holiday flats on the various islands of the Cyclades.
Selection of small boutique hotels in the Cyclades, luxury hotels, charming bed & breakfasts, romantic getaways, stylish and cool holiday flats and luxury villas in the Cyclades:
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Bed and Breakfast - Medium BudgetAria Lito Mansion is a 4-star hotel in the town of Fira. Set amidst fragrant gardens in the quaint and vibrant town Fira in Santorini Island of Greece, the charming luxury hotel Aria Lito in Santorini is a prestigious luxury hotel in the Cyclades offering elegant accommodation with a high standard of comfort.- Historic Quarters
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- 15 rooms
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- from 130 EUR
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Hotel & Self-Catering - High BudgetLocated in the lovely Vagia beach, COCO-MAT Eco Residences Serifos invites you to ease up, slow down and truly enjoy your time on a Greek island that can offer you the authentic – albeit alternative – Cycladic experience, without any uncalled-for tourist hassle.- Seaside (ocean front)
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- 13 properties
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- from 390 EUR
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Cottages - Medium BudgetStaying in one of ONAR’S cottages write above the ocean makes you part of the natural environment, and enjoying simple and genuine Greek hospitality will make your dreams come true. Onar, always trying to be a unique experience for every visitor, offers hotel amenities inspired by nature.- Seaside (ocean front)
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- 16 properties
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- from 280 EUR
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Boutique Hotel - LuxuryPloes boutique hotel on the island of Syros is a traditional 5-star hotel. Housed in an imposing, two-wing neoclassical mansion which is 150 years old. The hotel is decorated with a collection of artworks of late 20th century by Greek artists.- Seaside (ocean front)
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- 8 rooms
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- from 300 EUR
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Hotel & Self-Catering - High Budget- Greece
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- Cyclades
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- Santorini
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- Vourvoulos
Anema Boutique Hotel & Villas in Santorini is a boutique hotel with luxurious villas set in a 6000 square-meter property in the stunning countryside of Santorini. Discover a place, where luxury meets nature, local flair and freedom. Each of the 7 unique villas offer architectural details and private pools.- Coast
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- 7 rooms
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- from 264 EUR
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Boutique Hotel - High BudgetSavour all the best of Fira from Athina Luxury Suites. Just steps away from decadent restaurants and the cosmopolitan lifestyle of Santorini, but still in a private, picturesque neighbourhood. Every suite offers dramatic views of the volcano, the glittering Aegean Sea and stunning sunsets.- Island
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- 19 rooms
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- from 230 EUR
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Holiday homes villas - High Budget- Greece
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- Cyclades
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- Koufonisia
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- Finikas
Escape to the tranquil and remote Koufonisia Island in the Aegean Sea with Blue Harpist Villas. These luxurious holiday homes, located near Pori Beach, offer stunning panoramic views and various villa options to accommodate different group sizes. Some villas can host up to 10 people.- Island
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- 4 properties
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- from 240 EUR
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Boutique Hotel - Medium BudgetOnly 30 metres from Pollonia beach, the recently renovated suites invite you on a journey of discovery amid the natural beauty of the landscape and enjoy a moment to sit back relax and take in the tranquil atmosphere and salty air.- Seaside (ocean front)
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- 4 rooms
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- from 272 EUR
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Boutique Hotel - High BudgetImagine a dreamy sanctuary nestled in the gorgeous landscapes of Santorini, a place where luxury hospitality, privacy and tranquillity blend seamlessly with the minimal beauty of the Cycladic nature. Towering above the shimmering Aegean Sea, COCO-MAT Hotel Santorini is a haven of luxury.- Seaside (ocean front)
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- 15 rooms
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- from 197 EUR
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Holiday homes villas - Medium BudgetCycladic Villa Eroza is a three storey house with incredible views over Ioulida, the castle and the Aegean Sea. The small village of Ioulida, the island’s capital, with its typical red tiled roofs and cobbled lanes, sits in the middle of the islan...- Village
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- 5 people
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- from 229 EUR
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Hotel & Self-Catering - Medium BudgetELaiolithos boasts luxury suites in one of the most enchanting spots of Naxos Island. A green Eco-friendly hotel retreat defined by nature, tradition and hospitality that combines subtle elegance and luxury with sustainability. A holiday hideaway with character and soul dives you into the experience.- Coast
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- 5 rooms
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- from 359 EUR
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Holiday homes villas - High BudgetEros Keros in the Cyclades offers four independent luxury holiday houses with panoramic sea views, spacious living areas, bedrooms, kitchens, and private terraces. Accommodating 2-6 guests, they come with boutique hotel services for a unique experience of luxury and relaxation.- Seaside (ocean front)
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- 4 properties
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- from 440 EUR
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Hotel & Self-Catering - High Budget- Greece
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- Cyclades
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- Naxos
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- Agios Prokopios
Kavos Hotel in Naxos offers traditional-style accommodations, including studios, villas, and apartments, just 400 meters from the beach. It's a cosy, family-friendly, and award-winning retreat with stunning views, a bar, fitness centre, and special honeymoon offers.- Seaside (ocean front)
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- 16 rooms
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- from 428 EUR
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Holiday Apartments - Luxury- Greece
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- Cyclades
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- Santorini
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- Firostefani
Ikastikies is a unique boutique hotel in Santorini that combines modern art with traditional architecture. It offers stylish and tasteful accommodations with stunning views of the Caldera, the volcano, and Thirasia. The 4 Suites provide a range of facilities, including a pool, for a memorable stay.- Seaside (ocean front)
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- 4 properties
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- from 255 EUR
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Boutique Hotel - High BudgetIkies is a boutique hotel in Oia, Santorini, offering breath-taking caldera views. With 11 rooms, it combines traditional design with modern amenities. The hotel features a small pool, concierge services, and a focus on guest comfort and relaxation. Not suitable for children under 13 years.- Island
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- 13 rooms
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- from 328 EUR
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Holiday Apartments - Medium BudgetKapetan Tasos Suites, located in Pollonia, Milos, offers a picturesque beach getaway. The suites are elegantly furnished, respecting local architectural style while enhancing it with touches of elegance and timeless quality. You will leave with unforgettable memories and a desire to return.- Seaside (ocean front)
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- 11 properties
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- from 125 EUR
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Bed and Breakfast & self-catering - Low BudgetGuesthouse Lila, a charming 19th-century manor house in Ermoupolis, is a boutique hotel just 50 meters from the harbour. Breakfast is served at the table, including Greek specialties. The warm and cosy atmosphere, along with the helpful owners, make it a fantastic choice for an unforgettable stay.- Island
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- 6 rooms
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- from 90 EUR
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Luxury Hotel - High Budget- Greece
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- Cyclades
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- Santorini
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- Firostefani
The Mill House Studio and Suites in Firostefani, near Fira in Santorini, offer a dreamy getaway with breath-taking sunsets, traditional Cycladic style, and a central location. Enjoy wine on the porch, free airport transfers, volcano views, and a cosy atmosphere. Ideal for exploring Santorini's historic center.- Seaside (ocean front)
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- 6 rooms
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- from 330 EUR
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Boutique Hotel - High BudgetMilos Breeze is a luxury boutique hotel on the island of Milos, offering a sensory-rich experience. Enjoy breath-taking panoramic views, sandy beaches, cooling breezes, and the sound of the ocean. Delight in the scent of the sea breeze and Greek breakfast, and savour local cuisine nearby.- Seaside (ocean front)
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- 26 rooms
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- from 215.00 EUR
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Holiday Apartments - Low BudgetNefeli Sunset Studios in Milos, Greece, provide an ideal setting to enjoy breath-taking sunsets over the Aegean Sea. The studios, set in a classic Cycladic villa, offer relaxation, luxurious bathrooms, and warm Greek hospitality. Milos Island features stunning golden beaches and geological wonders.- Seaside (ocean front)
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- 7 properties
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- from 260 EUR
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Holiday Apartments - Medium BudgetNiki Savvas Studios in Milos offer an idyllic location near the sea, Pollonia town centre and Adamas port. The rooms are stylish, bright, and family-friendly, many with sea views for watching breath-taking sunsets. Ideal for exploring nearby islands like Kimolos and Polyaigos.- Island
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- 8 properties
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- from 200 EUR
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Cottages - Low BudgetOnos Living: the place where your feet go barefootYou arrive on the island of Tinos with the feeling that you’ve taken the wrong turn on the map — and somehow ended up exactly where you wanted to be. This is not Santorini or My...- Village
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- 2 properties
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- from 100 EUR
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Boutique Hotel - Low BudgetThe Ostraco Suites is a boutique hotel on Mykonos with stunning Aegean Sea views. It blends design with authentic details, featuring the island's aesthetics. The 22 Luxury Private Suites are decorated with white-washed walls, design furniture, and separate terraces. Enjoy cocktails at the sun terrace.- Seaside (ocean front)
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- 22 rooms
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- from 149 EUR
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Holiday Apartments - Medium BudgetPino di Loto is a collection of four luxurious and classy suites located in the picturesque fishing village of Kini on the Greek Island of Syros. The suites offer stunning views of Kini Beach and romantic sunsets. An adults-only lodging that provides a warm and welcoming atmosphere.- Seaside (ocean front)
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- 4 properties
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- from 250 EUR
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Spa Hotel - High Budget- Greece
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- Cyclades
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- Mykonos
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- Agios Stefanos
Rocabella Mykonos Art Hotel and Spa is a new boutique hotel in Agios Stefanos, Mykonos, boasting sea, town, and sunset views. The boutique hotel features traditional architectural design, a spa, a pool bar, and a gourmet restaurant. It offers a cosy, artistic, and elegant atmosphere for unforgettable vacations.- Seaside (ocean front)
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- 21 rooms
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- from 335 EUR
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Bed and Breakfast - Low BudgetSpeires Hotel on Iraklia Island offers comfortable rooms with sea or mountain views, wine bar, restaurant, and terrace. You can explore nearby villages and enjoy breakfast with a view. The hotel organizes speedboat excursions, and the staff is dedicated to ensuring a great holiday experience.- Countryside
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- 9 rooms
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- from 97 EUR
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Luxury Hotel - High Budget- Greece
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- Cyclades
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- Santorini
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- Imerovigli
Perched high on the Caldera cliff, between Fira and Imerovigli, The Vasilicos offers a unique stay in this impressive boutique hotel with the spirit of a summer house. Every corner has a story to tell, and each ledge is someone’s favourite spot.Th...- Countryside
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- 7 rooms
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- from 316 EUR
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Holiday homes villas - Medium BudgetThe eco-friendly tourist attraction Tinos Eco Lodge achieves sustainable utilization of the island's natural resources. A magnificent view of the sunrise and a breathtaking sight of the adjacent islands of Mykonos and Ikaria are provided by two houses with terraces facing east.- Coast
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- 2 properties
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- from 60 EUR
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Holiday homes villas - Medium Budget- Greece
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- Cyclades
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- Santorini
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- Finikia - Oia
Vino House in Santorini offers four elegant villas with Cycladic design and beautiful views. There's an outdoor pool, and guests can enjoy activities like cooking courses, massages, wine tasting, and helicopter tours. The villas are conveniently located near the beach and restaurants.- Countryside
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- 4 properties
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- from 230 EUR
Our short listed lodgings
Below you will find some more lovely accommodations we have recently discovered and that we will publish soon. You can book them through booking.com in the meantime.
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Boutique Hotel - LuxuryWith direct views of the Aegean Sea, the volcano and the world-famous caldera, the historic The Sea Captain's House, built in 1864, is located in the charming village of Oia, 220 steps from Ammoudi Beach. The hotel has 4 stylish suites with king-size beds, designed in Santorini's minimalist aesthetic with Renaissance influences. Each opens onto a furnished terrace with sea and caldera views.- Coast
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- 4 rooms
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- from 500 EUR
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Boutique Hotel - High BudgetAelia Mykonos can be found hidden within a blooming garden which embodies the charm of Cycladic architecture in the Ornos Village of Mykonos. Guests can enjoy mesmerizing views of the Aegean Sea from the private balcony or terrace. All units of Aelia feature a modern, minimalistic Cycladic décor and are fitted with beamed ceilings.- Coast
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- 6 rooms
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- from 400 EUR
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Hotel & Self-Catering - High Budget- Greece
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- Cyclades
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- Tinos
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- Triantaros
Located in the tranquil village of Triantaros, the Aeolis Tinos Suites offer charming accommodations ranging from suites to apartments, some with private pools, amidst 30 acres of olive groves and vineyards. Each private villa boasts stunning views of the Aegean Sea and nearby Cycladic islands, providing an immersive experience of Greek summer's glory. This exquisite retreat harmonizes modern comfort with the timeless beauty of nature, creating a perfect sanctuary for relaxation and exploration.- Village
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- 13 rooms
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- from 225 EUR
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Luxury Hotel - Luxury- Greece
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- Cyclades
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- Santorini
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- Imerovigli
The Tsitouras Collection Hotel is located in an 18th century mansion on Santorini. It offers 5 individually designed luxury suites with spectacular sunset views. The Tsitouras Collection stands for unrivalled luxury. Fira, the lively capital of the island, is just 700 metres from the caldera. The Tsitouras houses ancient works of art by the owner and architectural features such as domes, vaults and skylights that give the hotel something very special.- Island
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- 5 rooms
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- from 360 EUR
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Bed and Breakfast - High BudgetThe historic Xenon Apollonos building, dating back to 1830, has undergone a complete restoration, emerging as a delightful boutique B&B on the enchanting island of Syros. Spread across three hundred square meters.- Seaside (ocean front)
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- 3 rooms
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- from 262 EUR